Container Runtimes

Install Container runtimes

RunC/Singualrity/Docker

cat > 08.install.container-runtimes.all.sh << EOF
yum install -y runc docker singularity
systemctl start docker
systemctl enable docker
usermod -aG docker ec2-user
EOF
chmod +x 08.install.container-runtimes.all.sh 
aws s3 cp 08.install.container-runtimes.all.sh  s3://${BUCKET_NAME}/scripts/

NVIDIA Driver

wget -q https://gromacs-on-pcluster.workshop.aws/setup/pcluster/pcluster-post/pi-containers/_index.self-console.files/10.install.nvidia.compute.sh
chmod +x 10.install.nvidia.compute.sh
aws s3 cp 10.install.nvidia.compute.sh  s3://${BUCKET_NAME}/scripts/

Sarus

wget -q https://gromacs-on-pcluster.workshop.aws/setup/pcluster/pcluster-post/pi-containers/_index.self-console.files/13.install.sarus.all.sh
chmod +x 13.install.sarus.all.sh
aws s3 cp 13.install.sarus.all.sh  s3://${BUCKET_NAME}/scripts/